BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB034G03SP1|AL429946
(861 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1632 1677 0.0
>3x_Contig1632
Length = 13927
Score = 1677 bits (839), Expect = 0.0
Identities = 850/861 (98%)
Strand = Plus / Minus
Query: 1 gatcagatttgtccatctctatggcattccagataaatccttcaaggcatggtaatacgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3345 gatcagatttgtccatctctatggcattccagataaatccttcaaggcatggtaatacgt 3286
Query: 61 tctgagaagaacaacccawacttagacatgtttcgaaaatcttcctcaacaacgtcatat 120
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 3285 tctgagaagaacaacccatacttagacatgtttcgaaaatcttcctcaacaacgtcatat 3226
Query: 121 tcatatggtacaccaacaaaaaactgtaactgactttcaaatgtttcaattccaataatg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3225 tcatatggtacaccaacaaaaaactgtaactgactttcaaatgtttcaattccaataatg 3166
Query: 181 awagattctggccctgaacttcaaaraaaagacttttcaacaattgttgtggcacttggg 240
| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 3165 atagattctggccctgaacttcaaagaaaagacttttcaacaattgttgtggcacttggg 3106
Query: 241 aaacagtttgaagtactaagawagawgccaaamaattgcccctcccttcaacaaatttac 300
||||||||||||||||||||| ||| |||||| |||||||||||||||||||||||||||
Sbjct: 3105 aaacagtttgaagtactaagatagatgccaaacaattgcccctcccttcaacaaatttac 3046
Query: 301 attcagaattatcaatttcctctttagcttttttgagtagtactgagagagtattatctg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3045 attcagaattatcaatttcctctttagcttttttgagtagtactgagagagtattatctg 2986
Query: 361 gggaagcgtttacaaatctcgctactaggtctatacttttttctagtacatccatttcaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2985 gggaagcgtttacaaatctcgctactaggtctatacttttttctagtacatccatttcaa 2926
Query: 421 tgtccaaatctttaaccttttgaaagawacctaawaccatatcccattgcaaaawgacct 480
||||||||||||||||||||||||||| |||||| ||||||||||||||||||| |||||
Sbjct: 2925 tgtccaaatctttaaccttttgaaagatacctaataccatatcccattgcaaaatgacct 2866
Query: 481 caccaagatctgctaaactgttctcaatgtcgtattctttgtgtttgcctacwatatctt 540
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 2865 caccaagatctgctaaactgttctcaatgtcgtattctttgtgtttgcctactatatctt 2806
Query: 541 cttcgttaactaggaatccacttgatgactctgtatctgataaatcagggacatcaccga 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2805 cttcgttaactaggaatccacttgatgactctgtatctgataaatcagggacatcaccga 2746
Query: 601 ggcaattaatgaaatctatgaaatgtgaagttcttggttcgaatacatgaagaatgtcct 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2745 ggcaattaatgaaatctatgaaatgtgaagttcttggttcgaatacatgaagaatgtcct 2686
Query: 661 catcaagcaatctattgagctttttccagtaaaactccccttcgatgatatctatatwct 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 2685 catcaagcaatctattgagctttttccagtaaaactccccttcgatgatatctatattct 2626
Query: 721 cactgtctgcctcttcacttttattttgagtgttggaaccatcttttaaagcattattat 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2625 cactgtctgcctcttcacttttattttgagtgttggaaccatcttttaaagcattattat 2566
Query: 781 ttttatcgtaaattagtctgaaagattcgtcaacacgaactgaaaactttatcacatctg 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2565 ttttatcgtaaattagtctgaaagattcgtcaacacgaactgaaaactttatcacatctg 2506
Query: 841 aaccatccaatttgatactag 861
|||||||||||||||||||||
Sbjct: 2505 aaccatccaatttgatactag 2485
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.712 1.32
Gapped
Lambda K H
1.39 0.712 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7138
Number of Sequences: 1807
Number of extensions: 7138
Number of successful extensions: 49
Number of sequences better than 1.0e-20: 1
length of query: 861
length of database: 10,358,551
effective HSP length: 16
effective length of query: 845
effective length of database: 10,329,639
effective search space: 8728544955
effective search space used: 8728544955
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (30.0 bits)
S1: 12 (24.5 bits)
S2: 50 (100.5 bits)